Shubhra
Gupta
Gupta
Shubhra Gupta
21 Classic Avenue, Box #49
Toronto, Ontario, M5S 2Z3
(416) 586-9564 ext 3394
Codon
Optimization
INTRODUCTION: Codon optimization is a web-based tool which, can convert DNA sequence of Nucleotide or RNA sequence of Amino acids of any species into the DNA or RNA sequence of other species.
Important Note: Dear user, in order to get result you need to delete one blank space between the rows in codon usage table, which you copy and paste from codon usage database. See below for an example:
UUU 35.9( 34) UCU 27.4( 26) UAU 27.4( 26) UGU 6.3( 6)
UUC 33.8( 32) UCC 16.9( 16) UAC 6.3( 6) UGC 0.0( 0)
UUA 31.6( 30) UCA 2.1( 2) UAA 0.0( 0) UGA 2.1( 2)
UUG 25.3( 24) UCG 2.1( 2) UAG 0.0( 0) UGG 35.9( 34)
CUU 23.2( 22) CCU 23.2( 22) CAU 21.1( 20) CGU 19.0( 18)
CUC 8.4( 8) CCC 16.9( 16) CAC 6.3( 6) CGC 2.1( 2)
CUA 21.1( 20) CCA 8.4( 8) CAA 12.7( 12) CGA 6.3( 6)
CUG 6.3( 6) CCG 6.3( 6) CAG 4.2( 4) CGG 0.0( 0)
AUU 25.3( 24) ACU 23.2( 22) AAU 16.9( 16) AGU 10.5( 10)
AUC 16.9( 16) ACC 16.9( 16) AAC 14.8( 14) AGC 4.2( 4)
AUA 14.8( 14) ACA 4.2( 4) AAA 19.0( 18) AGA 8.4( 8)
AUG 16.9( 16) ACG 6.3( 6) AAG 8.4( 8) AGG 8.4( 8)
GUU 10.5( 10) GCU 50.6( 48) GAU 16.9( 16) GGU 55.9( 53)
GUC 6.3( 6) GCC 12.7( 12) GAC 10.5( 10) GGC 7.4( 7)
GUA 21.1( 20) GCA 16.9( 16) GAA 44.3( 42) GGA 48.5( 46)
GUG 19.0( 18) GCG 10.5( 10) GAG 2.1( 2) GGG 12.7( 12)
| Input sequence | Cut and paste a sequence of Nucleotides or Amino acids | |
| Input file (Species name) |
||
| Codon Usage Table Codon Usage Database | ||
Niagra
Fall
