Schedule - IT 470
(Foundations of Computational and Systems Biology)

Note: Please check this page regularly. Slides and Scribes are available at DA-IICT intranet server.

Week	Topics	Slides	Scribes
1 (July 30)	Introduction		See the Roche Genetics transcript and watch the HGP videos
2 (August 6)	Sequence Statistics		Siddharth Joshi and P. Adithya
3 (August 13)	Gene Finding I: ORF		Karan Sabharwal and Sasank Tatineni
4 (August 20)	Sequence Alignment		Akansha Modi and Subhabrata De
5 (August 27)	Gene Finding II: HMM		Rachit Agrawal and Hemang Modi
6 First Mid Term Week (Sep 3)	Test 1
7 (Sep 10)	Gene Finding III: HMM Computations (Forward and Viterbi Algo)
8 (Sep 17)	The Olfactory System, Human & Pathogens-I: SARS		Vishwas Jain
9 (Sep 24)	Systems Biology-I (Introduction, Chemistry and Process Algebra)
10 (Oct 1)	Systems Biology-II (Graphical Representation of Stochastic pi-calculus, SPIM), Algorithmic Drug Design		Bhuvan Prasad and Ankur Chakraborty
11 (Oct 8)	RNA Folding, Human & Pathogens-II: HIV-1 (K_A / K_S), RNAi
12 (Oct 15)	Protein Folding-I
13 (Oct 22)	Protein Folding -II (HP-model), Sequencing and Genome Assembly Project Talks on Systems Biology of Immune Systems and Human Pathogens Interactions: Case Studies (HIV-1), Systems Biology of Cancer and Stem Cells, Disordered Proteins, Non coding RNAs, Error Correcting DNA Microarrays, Antifreeze Proteins
14 (Oct 29)	Genomic Regulation		Gaurav Singh and Kautuk Gupta
15 (Nov 5)	Semester Break
16 (Nov 12)	The genomics of Wine-making		Muskan Kukreja and Saurabh Agarwal
17 (Nov 19)	Systems Biology-III Bitonal Membrane Systems
18 (Nov 26)	Final Exam

_

Note: Please check this page regularly. Slides and Scribes are available at DA-IICT intranet server.